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  5. GSVIVT01033959001

GSVIVT01033959001


Description : LIMR family protein At5g01460 OS=Arabidopsis thaliana


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033959001

Target Alias Description ECC score Gene Family Method Actions
AT5G01460 No alias LMBR1-like membrane protein 0.06 OrthoFinder output from all 47 species
Aev_g02363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre01.g023400 No alias LIMR family protein Os06g0128200 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Dcu_g05623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g03760.1 LOC_Os06g03760 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Mp5g20730.1 No alias LIMR family protein At3g08930 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g13114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029882_P001 Zm00001e029882 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e036634_P001 Zm00001e036634 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 278 487
IPR006876 LMBR1-like_membr_prot 9 274
No external refs found!