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  5. GSVIVT01033782001

GSVIVT01033782001


Description : Ribosome production factor 2 homolog OS=Arabidopsis thaliana


Gene families : OG0006885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033782001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT3G23620 No alias Ribosomal RNA processing Brix domain protein 0.1 OrthoFinder output from all 47 species
Adi_g009091 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g12213 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.01G026800.1 Ceric.01G026800 component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.06 OrthoFinder output from all 47 species
Cre03.g197000 No alias Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Ehy_g06742 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Gb_27395 No alias component ARPF2 of ARPF2-ARRS1 complex 0.08 OrthoFinder output from all 47 species
LOC_Os01g33030.1 LOC_Os01g33030 component ARPF2 of ARPF2-ARRS1 complex 0.11 OrthoFinder output from all 47 species
MA_89741g0010 No alias component ARPF2 of ARPF2-ARRS1 complex 0.02 OrthoFinder output from all 47 species
Mp4g01500.1 No alias component ARPF2 of ARPF2-ARRS1 complex 0.11 OrthoFinder output from all 47 species
Pp3c4_19370V3.1 Pp3c4_19370 Ribosomal RNA processing Brix domain protein 0.04 OrthoFinder output from all 47 species
Sam_g11434 No alias component *(ARPF2) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Smo73689 No alias Ribosome production factor 2 homolog OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Solyc10g083600.2.1 Solyc10g083600 component ARPF2 of ARPF2-ARRS1 complex 0.12 OrthoFinder output from all 47 species
Zm00001e032080_P001 Zm00001e032080 component ARPF2 of ARPF2-ARRS1 complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR007109 Brix 35 231
No external refs found!