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  5. GSVIVT01033777001

GSVIVT01033777001 (DML1, ROS1)


Aliases : DML1, ROS1

Description : DNA damage response.DNA repair mechanisms.base excision repair (BER).bifunctional DNA glycosylase/lyase (ROS1)


Gene families : OG0001282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033777001
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00215000 DME,... DNA damage response.DNA repair mechanisms.base excision... 0.04 OrthoFinder output from all 47 species
AT2G36490 DML1, ROS1 demeter-like 1 0.05 OrthoFinder output from all 47 species
AT3G10010 DML2 demeter-like 2 0.05 OrthoFinder output from all 47 species
Adi_g029370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14693 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g008897 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Dcu_g12762 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.04 OrthoFinder output from all 47 species
Ehy_g29590 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11900.1 DME, LOC_Os01g11900 methylcytosine-specific DNA glycosylase (ROS1).... 0.03 OrthoFinder output from all 47 species
LOC_Os02g29380.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1) 0.05 OrthoFinder output from all 47 species
LOC_Os05g37350.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.03 OrthoFinder output from all 47 species
LOC_Os05g37410.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.04 OrthoFinder output from all 47 species
Msp_g20128 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018728 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.04 OrthoFinder output from all 47 species
Spa_g14115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014575_P001 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.04 OrthoFinder output from all 47 species
Zm00001e031766_P003 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
InterPro domains Description Start Stop
IPR028925 RRM_DME 1355 1455
IPR028924 Perm-CXXC 1321 1352
No external refs found!