1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01033580001

GSVIVT01033580001


Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033580001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
AMTR_s00013p00068990 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
AMTR_s00023p00150860 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00023p00171820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G28580 No alias Plant protein of unknown function (DUF247) 0.08 OrthoFinder output from all 47 species
AT2G44930 No alias Plant protein of unknown function (DUF247) 0.09 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.08 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.07 OrthoFinder output from all 47 species
AT3G50160 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
Aop_g06594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22023.t1 Aspi01Gene22023 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22908.t1 Aspi01Gene22908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51578.t1 Aspi01Gene51578 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61845.t1 Aspi01Gene61845 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72945.t1 Aspi01Gene72945 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G007100.1 Ceric.30G007100 not classified & original description: pacid=50608898... 0.05 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027389001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01035823001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
Gb_34674 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_34677 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_37280 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g15230.1 LOC_Os05g15230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g42582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_109716g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g23330.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g21408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018539 No alias not classified & original description: CDS=1-1374 0.03 OrthoFinder output from all 47 species
Solyc01g057260.4.1 Solyc01g057260 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g019313.1.1 Solyc04g019313 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Solyc10g079530.2.1 Solyc10g079530 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e024232_P001 Zm00001e024232 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 86 461
No external refs found!