1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01033571001

GSVIVT01033571001 (BOP2)


Aliases : BOP2

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.BOP transcriptional co-activator


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033571001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00115370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.04 OrthoFinder output from all 47 species
AT3G57130 BOP1 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.04 OrthoFinder output from all 47 species
Aev_g11585 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12706 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20218.t1 BOP2, Aspi01Gene20218 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013694 BOP2 not classified & original description: CDS=1-1683 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036623 BOP2 transcriptional co-activator *(BOP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G028200.1 BOP2, Ceric.15G028200 not classified & original description: pacid=50640925... 0.05 OrthoFinder output from all 47 species
Dcu_g07591 BOP1 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08411 ATNPR3, NPR3 receptor protein (NPR3|4). salicylic acid receptor... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.05 OrthoFinder output from all 47 species
LOC_Os12g04410.1 BOP2, LOC_Os12g04410 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Pir_g12932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g079750.2.1 BOP2, Solyc10g079750 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Zm00001e009187_P001 BOP2, Zm00001e009187 transcriptional co-activator (BOP) 0.08 OrthoFinder output from all 47 species
Zm00001e018649_P001 BOP2, Zm00001e018649 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Zm00001e024092_P001 BOP2, Zm00001e024092 BTB/POZ domain and ankyrin repeat-containing protein... 0.1 OrthoFinder output from all 47 species
Zm00001e028331_P001 BOP2, Zm00001e028331 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Zm00001e039194_P004 BOP2, Zm00001e039194 transcriptional co-activator (BOP) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 197 279
IPR024228 NPR_central_dom 134 191
No external refs found!