GSVIVT01033563001


Description : Phytohormones.signalling peptides.CRP (cysteine-rich-peptide) category.GASA/GAST family.GASA precursor polypeptide


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033563001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.01 OrthoFinder output from all 47 species
Ala_g34519 GASA1 GASA precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g03520 GASA3 GASA precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species
MA_132217g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Nbi_g25284 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01424 No alias GASA precursor polypeptide & original description: none 0.02 ECC Pair graph </td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38874408" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1748826/74/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/908090" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/908090">Sam_g09846</a></td> <td><span class="text-muted">No alias</span></td> <td>GASA precursor polypeptide & original description: none</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38874410" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1748826/74/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1696195" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1696195">Solyc01g107370.3.1</a></td> <td>Solyc01g107370</td> <td>GASA precursor polypeptide</td> <td>0.09</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38874412" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1748826/74/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1710508" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1710508">Solyc06g069790.4.1</a></td> <td>Solyc06g069790</td> <td>GASA precursor polypeptide</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38874414" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1748826/74/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/561211" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/561211">Tin_g12034</a></td> <td>GASA3</td> <td>GASA precursor polypeptide & original description: none</td> <td>0.01</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/38874416" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/1748826/74/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No Predicted GO terms available for this sequence</p></td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/3150">IPR003854</a></td> <td class="col-xs-5">GASA</td> <td class="col-xs-2">47</td> <td class="col-xs-2">106</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table 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