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  5. GSVIVT01033508001

GSVIVT01033508001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0000799 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000799_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033508001
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00176740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Adi_g036602 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Len_g07943 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Pnu_g33569 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Sam_g09468 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Sam_g49614 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Spa_g41145 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Spa_g56120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 206 230
IPR000571 Znf_CCCH 36 59
IPR004088 KH_dom_type_1 114 177
No external refs found!