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  5. GSVIVT01033505001

GSVIVT01033505001 (LEA4-5)


Aliases : LEA4-5

No description available


Gene families : OG0012121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033505001
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT5G06760 LEA4-5 Late Embryogenesis Abundant 4-5 0.18 OrthoFinder output from all 47 species
Azfi_s0073.g037164 No alias not classified & original description: CDS=1-531 0.07 OrthoFinder output from all 47 species
Gb_10243 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g23870.1 LEA4-5, LOC_Os08g23870 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os09g10620.1 LOC_Os09g10620 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
MA_10433469g0010 LEA4-5 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g24473 LEA4-5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g058330.3.1 Solyc03g058330 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc10g078770.2.1 LEA4-5, Solyc10g078770 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc10g078780.2.1 LEA4-5, Solyc10g078780 no hits & (original description: none) 0.23 OrthoFinder output from all 47 species
Zm00001e040103_P001 Zm00001e040103 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009793 embryo development ending in seed dormancy IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR005513 LEA_1 1 70
No external refs found!