LOC_Os12g30540 (Os12g0489100, Os12g0489200)


Aliases : Os12g0489100, Os12g0489200

Description : 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease Encodes a ubiquitin-specific protease. ubiquitin-specific protease 12 (UBP12)


Gene families : OG_01_0001043 (Gene family) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g30540
Cluster HCCA cluster: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
AT3G11910 UBP13 ubiquitin-specific protease 13 0.05 Gene family
AT5G06600 UBP12 ubiquitin-specific protease 12 0.06 Gene family
GSVIVT01022498001 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.05 Gene family
GSVIVT01034603001 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family
GSVIVT01037528001 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
MA_10426331g0010 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.05 Gene family
MA_10427483g0020 No alias 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.03 Gene family
MA_10428769g0010 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.05 Gene family
Smo444302 PACid_15415833 No description available 0.03 Gene family
Solyc10g081610.2.1 Solyc10g081610.2 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.05 Gene family
Solyc11g006320.2.1 Solyc11g006320.2 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
Solyc11g071700.2.1 Solyc11g071700.2 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.03 Gene family
Zm00001d018859 GRMZM2G018508 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.14 Gene family
Zm00001d023640 GRMZM2G303655,... 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.09 Gene family
Zm00001d041035 GRMZM2G014805 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.04 Gene family
Zm00001d043312 GRMZM2G071441 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.12 Gene family
Zm00001d052943 GRMZM2G418232,... 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 207 528
IPR029346 USP_C 894 1104
IPR002083 MATH/TRAF_dom 69 189
IPR024729 USP7_ICP0-binding_dom 632 884
No external refs found!