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Description : Protein SINE1 OS=Arabidopsis thaliana
Gene families : OG0001812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001812_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01033391001 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00079090 | evm_27.TU.AmTr_v1... | Protein SINE1 OS=Arabidopsis thaliana | 0.23 | OrthoFinder output from all 47 species | |
| AT3G03970 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g17247 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g08768 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.17 | OrthoFinder output from all 47 species | |
| Aop_g12633 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.19 | OrthoFinder output from all 47 species | |
| Aspi01Gene25704.t1 | Aspi01Gene25704 | actin cytoskeleton connecting factor *(SINE) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0245.g059990 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.27G042900.1 | Ceric.27G042900 | actin cytoskeleton connecting factor *(SINE) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.38G061800.1 | Ceric.38G061800 | actin cytoskeleton connecting factor *(SINE) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08088 | No alias | actin cytoskeleton connecting factor (SINE) | 0.21 | OrthoFinder output from all 47 species | |
| Gb_10260 | No alias | actin cytoskeleton connecting factor (SINE) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os11g37100.1 | LOC_Os11g37100 | actin cytoskeleton connecting factor (SINE) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04218 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_162159g0010 | No alias | actin cytoskeleton connecting factor (SINE) | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g04912 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05394 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.2 | OrthoFinder output from all 47 species | |
| Ppi_g10424 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015309 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0176.g024613 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g27579 | No alias | actin cytoskeleton connecting factor *(SINE) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g062700.4.1 | Solyc03g062700 | actin cytoskeleton connecting factor (SINE) | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g09004 | No alias | acTin cytoskeleton connecTing factor *(SINE) & original... | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e024451_P001 | Zm00001e024451 | actin cytoskeleton connecting factor (SINE) | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |