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  5. GSVIVT01033067001

GSVIVT01033067001 (AGL7, AP1)


Aliases : AGL7, AP1

Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033067001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00019490 AGL16,... No description available 0.03 OrthoFinder output from all 47 species
AT1G77980 AGL66 AGAMOUS-like 66 0.02 OrthoFinder output from all 47 species
Adi_g083241 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23467 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17769.t1 AGL6, Aspi01Gene17769 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0062.g035272 AGL16 MADS/AGL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g27482 AGL104 MADS/AGL-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Gb_15398 PI transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
LOC_Os11g43740.1 AGL65, LOC_Os11g43740 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Lfl_g32782 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_276701g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
MA_34737g0010 AGL17 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g07685 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012024_P001 AGL4, SEP2,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e035509_P002 AGL7, AP1, Zm00001e035509 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 108 170
IPR002100 TF_MADSbox 10 57
No external refs found!