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  5. GSVIVT01033029001

GSVIVT01033029001 (ATSKL1, SKL1)


Aliases : ATSKL1, SKL1

Description : Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase


Gene families : OG0001829 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001829_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033029001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00187060 ATSKL1, SKL1,... Amino acid metabolism.biosynthesis.shikimate... 0.04 OrthoFinder output from all 47 species
Aev_g12920 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ala_g25143 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.04G037500.1 SK1, ATSK1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Cre10.g436350 SK1, ATSK1 Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
Dde_g24584 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Len_g20987 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011558 SK1, ATSK1 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sam_g50034 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031322 Shikimate/glucono_kinase 111 224
No external refs found!