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  5. GSVIVT01032913001

GSVIVT01032913001 (TAF8)


Aliases : TAF8

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF8 component


Gene families : OG0002836 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002836_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032913001
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Dcu_g01506 TAF8 component *(TAF8) of TFIId basal transcription... 0.04 OrthoFinder output from all 47 species
LOC_Os12g38620.1 TAF8, LOC_Os12g38620 component TAF8 of TFIId basal transcription regulation complex 0.06 OrthoFinder output from all 47 species
Len_g12286 TAF8 component *(TAF8) of TFIId basal transcription... 0.02 OrthoFinder output from all 47 species
Smo229939 TAF8 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Solyc09g008150.3.1 TAF8, Solyc09g008150 component TAF8 of TFIId basal transcription regulation complex 0.05 OrthoFinder output from all 47 species
Spa_g26538 TAF8 component *(TAF8) of TFIId basal transcription... 0.04 OrthoFinder output from all 47 species
Tin_g08709 TAF8 component *(TAF8) of TFIId basal transcription... 0.04 OrthoFinder output from all 47 species
Zm00001e018349_P001 TAF8, Zm00001e018349 component TAF8 of TFIId basal transcription regulation complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006565 BTP 28 94
IPR019473 TFIID_su8_C 160 208
No external refs found!