1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01032826001

GSVIVT01032826001


Description : Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032826001
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00205p00026120 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.03 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.26 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
GSVIVT01012169001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024102001 RPP13 Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_29699 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g11960.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14380.1 LOC_Os11g14380 no description available(sp|q2r8l1|rga5s_orysj : 414.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g16510.1 LOC_Os11g16510 no description available(sp|p0do08|pikm2_orysj : 87.0) 0.02 OrthoFinder output from all 47 species
Solyc04g025840.3.1 RPP13, Solyc04g025840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g053020.3.1 ZAR1, Solyc07g053020 Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e010878_P001 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 230.0) 0.03 OrthoFinder output from all 47 species
Zm00001e011354_P001 Zm00001e011354 no description available(sp|p0do08|pikm2_orysj : 121.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!