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  5. GSVIVT01032824001

GSVIVT01032824001


Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032824001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00165330 RPM1, RPS3,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00037160 ZAR1,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.03 OrthoFinder output from all 47 species
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
GSVIVT01007238001 HRT, RCY1, RPP8 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01012165001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01024097001 No alias Probable disease resistance RPP8-like protein 2... 0.05 OrthoFinder output from all 47 species
GSVIVT01024102001 RPP13 Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032825001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
GSVIVT01032827001 No alias Putative disease resistance protein At1g50180... 0.09 OrthoFinder output from all 47 species
GSVIVT01032828001 No alias Putative disease resistance protein At1g50180... 0.05 OrthoFinder output from all 47 species
LOC_Os01g23380.1 RPP13, LOC_Os01g23380 no description available(sp|p0do08|pikm2_orysj : 348.0) 0.04 OrthoFinder output from all 47 species
LOC_Os02g17304.1 RPP13, LOC_Os02g17304 no description available(sp|q2r8l1|rga5s_orysj : 379.0) 0.04 OrthoFinder output from all 47 species
LOC_Os04g21890.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g46300.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g07920.1 LOC_Os08g07920 no description available(sp|q2qzf1|pik6_orysj : 119.0) 0.02 OrthoFinder output from all 47 species
LOC_Os08g28570.1 LOC_Os08g28570 no description available(sp|q2r8l1|rga5s_orysj : 394.0) 0.03 OrthoFinder output from all 47 species
LOC_Os09g09490.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g11990.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g12050.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12300.1 LOC_Os11g12300 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g12320.1 ZAR1, LOC_Os11g12320 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g12330.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g16510.1 LOC_Os11g16510 no description available(sp|p0do08|pikm2_orysj : 87.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g17140.1 LOC_Os12g17140 B3 domain-containing protein Os03g0164300 OS=Oryza... 0.04 OrthoFinder output from all 47 species
LOC_Os12g37760.1 LOC_Os12g37760 no description available(sp|p0do08|pikm2_orysj : 370.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g37770.1 LOC_Os12g37770 no description available(sp|f7j0n2|rga5r_orysj : 437.0) 0.04 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g005440.3.1 RPM1, RPS3,... RPM1 effector-triggered immunity CC-NLR-type effector receptor 0.04 OrthoFinder output from all 47 species
Zm00001e010878_P001 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 230.0) 0.04 OrthoFinder output from all 47 species
Zm00001e020947_P001 Zm00001e020947 Putative disease resistance protein RGA4 OS=Solanum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 170 422
IPR027944 SEO_C 1113 1184
No external refs found!