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  5. GSVIVT01032797001

GSVIVT01032797001 (EMB2771)


Aliases : EMB2771

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC1 component


Gene families : OG0006432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032797001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT5G05560 EMB2771 E3 ubiquitin ligase, putative 0.04 OrthoFinder output from all 47 species
Aev_g15018 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Als_g17485 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.06 OrthoFinder output from all 47 species
Azfi_s0130.g049023 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.06 OrthoFinder output from all 47 species
Ceric.30G071400.1 EMB2771, Ceric.30G071400 component *(APC1) of (APC/C)-dependent ubiquitination... 0.06 OrthoFinder output from all 47 species
Cre13.g579100 EMB2771 Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g12987 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Dde_g23656 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Gb_37425 EMB2771 component APC1 of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Len_g11449 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Lfl_g38762 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
MA_10428431g0010 EMB2771 Anaphase-promoting complex subunit 1 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Mp4g04020.1 EMB2771 component APC1 of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Pir_g58795 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Solyc06g048460.2.1 EMB2771, Solyc06g048460 component APC1 of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Zm00001e031482_P002 EMB2771, Zm00001e031482 component APC1 of (APC/C)-dependent ubiquitination... 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005680 anaphase-promoting complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024990 Apc1 110 224
IPR002015 Proteasome/cyclosome_rpt 1413 1445
No external refs found!