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  5. GSVIVT01032789001

GSVIVT01032789001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032789001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00150740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT2G40200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.03 OrthoFinder output from all 47 species
Adi_g033761 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01843 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06652 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g026970 BHLH32, ATAIG1, TMO5 bHLH-type transcription factor & original description: CDS=50-919 0.03 OrthoFinder output from all 47 species
Dac_g08102 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03913 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009166001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01025747001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_26672 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os03g15440.1 LOC_Os03g15440 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g13562 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01892 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_132680g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_65818g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g05533 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11399 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19331 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51509 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo412681 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Smo56610 BHLH32, ATAIG1, TMO5 RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
Solyc02g076920.3.1 Solyc02g076920 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc04g006990.3.1 Solyc04g006990 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g014360.3.1 Solyc04g014360 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g009880.3.1 Solyc05g009880 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc06g051260.4.1 Solyc06g051260 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc07g053290.3.1 Solyc07g053290 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Spa_g08577 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18354 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e004145_P001 Zm00001e004145 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e006132_P001 Zm00001e006132 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e022445_P001 Zm00001e022445 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e031100_P001 Zm00001e031100 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e034395_P001 Zm00001e034395 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 111 158
No external refs found!