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  5. GSVIVT01032736001

GSVIVT01032736001


Description : B2 protein OS=Daucus carota


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032736001

Target Alias Description ECC score Gene Family Method Actions
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.07 OrthoFinder output from all 47 species
Adi_g023543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G040700.1 Ceric.18G040700 not classified & original description: pacid=50621172... 0.04 OrthoFinder output from all 47 species
Ceric.24G054900.1 Ceric.24G054900 not classified & original description: pacid=50628695... 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.03 OrthoFinder output from all 47 species
LOC_Os06g07770.1 LOC_Os06g07770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g35610.1 LOC_Os07g35610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 94.4) 0.02 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_26274g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g21920.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.4) 0.02 OrthoFinder output from all 47 species
Nbi_g25785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g23790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013885 No alias not classified & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Solyc06g050610.3.1 Solyc06g050610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 102.0) 0.04 OrthoFinder output from all 47 species
Solyc06g068853.1.1 Solyc06g068853 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g076330.3.1 Solyc10g076330 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.04 OrthoFinder output from all 47 species
Spa_g30195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020733_P001 Zm00001e020733 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.03 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.02 OrthoFinder output from all 47 species
Zm00001e031085_P001 Zm00001e031085 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 113.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 37 165
IPR006652 Kelch_1 439 482
IPR006652 Kelch_1 533 577
IPR006652 Kelch_1 491 530
IPR006652 Kelch_1 579 624
IPR006652 Kelch_1 626 658
No external refs found!