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  5. GSVIVT01032602001

GSVIVT01032602001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032602001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Adi_g008851 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g023570 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074839 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23685 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g43317 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G058300.1 Ceric.11G058300 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G062700.1 Ceric.11G062700 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Len_g08617 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g15410.1 No alias RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Ore_g17216 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23717 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58767 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60879 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091230.4.1 Solyc02g091230 RING-v-class E3 ligase 0.05 OrthoFinder output from all 47 species
Spa_g49193 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 65 110
No external refs found!