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Aliases : ATCFM2, CFM2
Description : RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM2-type splicing factor
Gene families : OG0001162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00265220 | ATCFM3A, CFM3A,... | RNA processing.organelle machineries.RNA... | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00028p00245370 | ATCFM2, CFM2,... | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00045p00114550 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00079p00107040 | EMB1865,... | CRM-domain containing factor CFM3,... | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00079p00185530 | ATCRS1, CRS1,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G01370 | ATCFM2, CFM2 | CRM family member 2 | 0.11 | OrthoFinder output from all 47 species | |
| AT3G18390 | EMB1865 | CRS1 / YhbY (CRM) domain-containing protein | 0.09 | OrthoFinder output from all 47 species | |
| AT3G23070 | ATCFM3A, CFM3A | CRM family member 3A | 0.16 | OrthoFinder output from all 47 species | |
| AT4G14510 | ATCFM3B, CFM3B | CRM family member 3B | 0.03 | OrthoFinder output from all 47 species | |
| AT4G29750 | No alias | CRS1 / YhbY (CRM) domain-containing protein | 0.09 | OrthoFinder output from all 47 species | |
| AT5G16180 | ATCRS1, CRS1 | ortholog of maize chloroplast splicing factor CRS1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059394 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01593 | ATCFM2, CFM2 | plastidial RNA splicing factor *(CFM2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21267 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27469 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58822 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06265 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g19644 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g25751 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008527 | ATCFM2, CFM2 | not classified & original description: CDS=155-3025 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013833 | ATCFM2, CFM2 | not classified & original description: CDS=1-3243 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0211.g058121 | ATCFM2, CFM2 | not classified & original description: CDS=29-3361 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10843 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16678 | ATCFM3A, CFM3A | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G053300.1 | ATCFM2, CFM2,... | not classified & original description: pacid=50577844... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.23G047600.1 | ATCFM2, CFM2,... | not classified & original description: pacid=50611491... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.31G056300.1 | ATCFM2, CFM2,... | not classified & original description: pacid=50573909... | 0.11 | OrthoFinder output from all 47 species | |
| Dac_g20553 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07763 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g18891 | ATCFM2, CFM2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g25274 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25682 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12628 | EMB1865 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g21472 | ATCFM2, CFM2 | plastidial RNA splicing factor *(CFM2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_18301 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_18302 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_18303 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_37638 | ATCFM3A, CFM3A | CFM2-type plastidial RNA splicing factor. CFM3-type... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_39217 | EMB1865 | CFM2-type plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g39060.2 | ATCFM2, CFM2,... | CRM-domain containing factor CFM2, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g47850.1 | EMB1865, LOC_Os05g47850 | CRM-domain containing factor CFM3,... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os08g27150.1 | ATCRS1, CRS1,... | CRS1 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g19850.1 | LOC_Os09g19850 | CRM-domain containing factor CFM3,... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g37990.1 | ATCFM3A, CFM3A,... | CFM3-type plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Len_g08834 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g55562 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03478 | ATCFM2, CFM2 | plastidial RNA splicing factor *(CFM2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10233916g0010 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10432072g0010 | ATCFM3A, CFM3A | CFM2-type plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435740g0010 | EMB1865 | CFM2-type plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_8161870g0010 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g06280.1 | ATCFM2, CFM2 | CRM-domain containing factor CFM3,... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g43371 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10122 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17170 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25479 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g35546 | ATCFM2, CFM2 | plastidial RNA splicing factor *(CFM2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29461 | ATCFM2, CFM2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46980 | ATCFM3A, CFM3A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0160.g023856 | ATCFM2, CFM2 | not classified & original description: CDS=91-3327 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g08382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28510 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g52089 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo120007 | No alias | CRM-domain containing factor CFM3,... | 0.05 | OrthoFinder output from all 47 species | |
| Smo412905 | No alias | CRM-domain containing factor CFM3,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g119450.3.1 | EMB1865, Solyc03g119450 | CRM-domain containing factor CFM3,... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc07g039500.4.1 | Solyc07g039500 | CRM-domain containing factor CFM3,... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc09g083350.3.1 | ATCFM3A, CFM3A,... | CFM3-type plastidial RNA splicing factor | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e004284_P002 | ATCRS1, CRS1,... | CRS1 plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011272_P001 | ATCFM3A, CFM3A,... | CFM3-type plastidial RNA splicing factor | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e032339_P002 | EMB1865, Zm00001e032339 | CRM-domain containing factor CFM3,... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e033939_P001 | Zm00001e033939 | CRM-domain containing factor CFM3,... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |