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  5. GSVIVT01032523001

GSVIVT01032523001 (ATCSLC04, CSLC04,...)


Aliases : ATCSLC04, CSLC04, CSLC4, ATCSLC4

Description : Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type 1,4-beta-glucan synthase


Gene families : OG0000269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032523001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00171550 ATCSLC05,... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 OrthoFinder output from all 47 species
AT2G24630 ATCSLC8, ATCSLC08, CSLC08 Glycosyl transferase family 2 protein 0.03 OrthoFinder output from all 47 species
AT4G16590 ATCSLA1, ATCSLA01, CSLA01 cellulose synthase-like A01 0.04 OrthoFinder output from all 47 species
AT5G16190 CSLA11, ATCSLA11 cellulose synthase like A11 0.03 OrthoFinder output from all 47 species
Adi_g006848 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098712 ATCSLC05,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18463 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19078 ATCSLC12, CSLC12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09556 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09557 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12571 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000681 ATCSLC8, ATCSLC08, CSLC08 EC_2.4 glycosyltransferase & original description: CDS=1105-3207 0.03 OrthoFinder output from all 47 species
Cba_g17036 ATCSLC05,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G046900.1 ATCSLC05,... EC_2.4 glycosyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g05675 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10121 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08604 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034719001 ATCSLA9, RAT4,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.04 OrthoFinder output from all 47 species
Gb_24488 ATCSLC05,... 1,4-beta-glucan synthase (CSLC) 0.03 OrthoFinder output from all 47 species
Gb_27616 ATCSLA9, RAT4,... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09930.1 CSLA02, ATCSLA2,... mannan synthase (CSLA) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51060.1 ATCSLA9, RAT4,... mannan synthase (CSLA) 0.03 OrthoFinder output from all 47 species
LOC_Os06g42020.1 ATCSLA9, RAT4,... mannan synthase (CSLA) 0.04 OrthoFinder output from all 47 species
Len_g22962 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000032 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: CDS=377-2032 0.03 OrthoFinder output from all 47 species
Sam_g19981 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo230176 ATCSLA9, RAT4,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
Solyc05g055410.3.1 ATCSLA9, RAT4,... mannan synthase (CSLA) 0.08 OrthoFinder output from all 47 species
Solyc06g074630.4.1 CSLA02, ATCSLA2,... mannan synthase (CSLA) 0.03 OrthoFinder output from all 47 species
Solyc08g006310.3.1 ATCSLC05,... 1,4-beta-glucan synthase (CSLC) 0.03 OrthoFinder output from all 47 species
Solyc12g088240.2.1 ATCSLC12,... 1,4-beta-glucan synthase (CSLC) 0.05 OrthoFinder output from all 47 species
Tin_g21002 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025054_P003 CSLA02, ATCSLA2,... mannan synthase (CSLA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 294 488
No external refs found!