AMTR_s00069p00150990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.120

Description : DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana


Gene families : OG_01_0000599 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000599_tree ,
OG_02_0006334 (LandPlants) Phylogenetic Tree(s): OG_02_0006334_tree ,
OG_03_0007963 (SeedPlants) Phylogenetic Tree(s): OG_03_0007963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00150990
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Pp3c15_4150V3.1 No alias nuclear RNA polymerase D1B 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000722 RNA_pol_asu 401 559
IPR007083 RNA_pol_Rpb1_4 734 775
IPR007080 RNA_pol_Rpb1_1 98 210
IPR007066 RNA_pol_Rpb1_3 563 689
No external refs found!