GSVIVT01032502001 (CNGC18, ATCNGC18)

Aliases : CNGC18, ATCNGC18

Description : Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type)

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01032502001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00268470	ATCNGC14,...	Solute transport.channels.VIC superfamily.cyclic...	0.03	OrthoFinder output from all 47 species
AT1G01340	ATCNGC10, CNGC10, ACBK1	cyclic nucleotide gated channel 10	0.03	OrthoFinder output from all 47 species
Azfi_s0164.g054260	ATCNGC9, CNGC9	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01027087001	ATCNGC1, CNGC1	Solute transport.channels.VIC superfamily.cyclic...	0.03	OrthoFinder output from all 47 species
LOC_Os02g54760.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Spa_g29894	DND1, ATCNGC2, CNGC2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g39811	DND1, ATCNGC2, CNGC2	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	HCCA
MF	GO:0016289	CoA hydrolase activity	IEP	HCCA
MF	GO:0016790	thiolester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	48	401
IPR000595	cNMP-bd_dom	497	585

External Links

No external refs found!