1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01032455001

GSVIVT01032455001


Description : Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032455001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00208300 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00080p00099010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G40340 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g060541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63312.t1 Aspi01Gene63312 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035473 No alias not classified & original description: CDS=1-4050 0.03 OrthoFinder output from all 47 species
Cba_g07712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.04 OrthoFinder output from all 47 species
Ceric.04G099500.1 Ceric.04G099500 not classified & original description: pacid=50631612... 0.05 OrthoFinder output from all 47 species
Ceric.29G059500.1 Ceric.29G059500 N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.05 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18977 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10434021g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8546g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02506 No alias EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Nbi_g03857 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.04 OrthoFinder output from all 47 species
Nbi_g13020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g28169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g22793 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.03 OrthoFinder output from all 47 species
Pir_g25442 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001848 No alias not classified & original description: CDS=1-3909 0.04 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g086750.3.1 Solyc02g086750 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g31146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 8 93
No external refs found!