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  5. GSVIVT01032259001

GSVIVT01032259001


Description : Pentatricopeptide repeat-containing protein At3g42630 OS=Arabidopsis thaliana


Gene families : OG0008132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032259001
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Adi_g012984 No alias splicing factor *(PBF2) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g04651 No alias splicing factor *(PBF2) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10905 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23524 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07285 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67893 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09017.t1 Aspi01Gene09017 splicing factor *(PBF2) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g08483 No alias splicing factor *(PBF2) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.04G053500.1 Ceric.04G053500 splicing factor *(PBF2) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g20674 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01539 No alias splicing factor *(PBF2) & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g14794 No alias splicing factor *(PBF2) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17567 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07942 No alias splicing factor *(PBF2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19207 No alias splicing factor *(PBF2) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16750 No alias splicing factor *(PBF2) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34109 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18930 No alias splicing factor *(PBF2) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g15296 No alias splicing factor *(PBF2) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024907 No alias splicing factor *(PBF2) & original description: CDS=113-1771 0.02 OrthoFinder output from all 47 species
Spa_g04432 No alias splicing factor *(PBF2) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23883 No alias splicing factor *(PBF2) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 162 191
IPR002885 Pentatricopeptide_repeat 54 102
No external refs found!