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  5. GSVIVT01032204001

GSVIVT01032204001


Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032204001
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT3G14470 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
GSVIVT01005320001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01013310001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01013507001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01013533001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01019351001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.04 OrthoFinder output from all 47 species
GSVIVT01028665001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os08g42930.1 LOC_Os08g42930 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43000.1 LOC_Os08g43000 Putative disease resistance protein RGA3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc01g106410.3.1 Solyc01g106410 Putative disease resistance protein RGA1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc08g007640.1.1 Solyc08g007640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g071420.3.1 Solyc11g071420 Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 101 141
No external refs found!