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  5. GSVIVT01032103001

GSVIVT01032103001 (ATCCD1, CCD1, NCED1, ATNCED1)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CCD carotenoid cleavage dioxygenase


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032103001
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00253450 ATCCD1, CCD1,... Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.04 OrthoFinder output from all 47 species
Ala_g28152 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000949.24 ATCCD1, CCD1,... No description available 0.02 OrthoFinder output from all 47 species
LOC_Os12g44310.1 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.02 OrthoFinder output from all 47 species
Len_g13711 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ore_g18596 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Smo165469 ATCCD1, CCD1,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Spa_g09036 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Tin_g08721 ATCCD1, CCD1,... EC_1.13 oxidoreductase acTing on single donor with... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 57 535
No external refs found!