GSVIVT01032090001


No description available


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032090001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00215910 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00252730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00054230 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT2G41990 No alias CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant... 0.03 OrthoFinder output from all 47 species
AT3G08490 No alias BEST Arabidopsis thaliana protein match is: Late... 0.08 OrthoFinder output from all 47 species
AT3G24605 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G42860 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g043372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22107.t1 Aspi01Gene22107 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33549.t1 Aspi01Gene33549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046456 No alias not classified & original description: CDS=162-1187 0.03 OrthoFinder output from all 47 species
Cba_g07489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G076700.1 Ceric.01G076700 not classified & original description: pacid=50591443... 0.04 OrthoFinder output from all 47 species
Ceric.04G091500.1 Ceric.04G091500 not classified & original description: pacid=50630876... 0.03 OrthoFinder output from all 47 species
Ceric.31G048500.1 Ceric.31G048500 not classified & original description: pacid=50574815... 0.04 OrthoFinder output from all 47 species
Dac_g09294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25242 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g00454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38619 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g44740.1 LOC_Os02g44740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g11710.1 LOC_Os03g11710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.05 OrthoFinder output from all 47 species
Len_g54658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436872g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8816169g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g12850.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g29304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62547 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008965 No alias not classified & original description: CDS=1104-2096 0.03 OrthoFinder output from all 47 species
Sam_g08763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g087140.4.1 Solyc01g087140 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g042880.3.1 Solyc11g042880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g07963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000854_P001 Zm00001e000854 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e007480_P002 Zm00001e007480 microtubule-interacting component CC of cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e008104_P001 Zm00001e008104 microtubule-interacting component CC of cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e015379_P001 Zm00001e015379 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!