LOC_Os12g28260 (Os12g0468500)


Aliases : Os12g0468500

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 7 (CNGC7)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os12g28260
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.02 Gene family
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.02 Gene family
AT5G14870 CNGC18, ATCNGC18 cyclic nucleotide-gated channel 18 0.02 Gene family
GSVIVT01007785001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Solyc03g116850.3.1 Solyc03g116850.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d007925 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
Zm00001d013688 GRMZM2G077828 34.22 transport.cyclic nucleotide or calcium regulated... 0.09 Gene family
Zm00001d041309 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 116 445
No external refs found!