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  5. GSVIVT01032046001

GSVIVT01032046001


Description : Clustered mitochondria protein OS=Arabidopsis thaliana


Gene families : OG0004309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032046001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00221290 evm_27.TU.AmTr_v1... Clustered mitochondria protein OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT3G52140 No alias tetratricopeptide repeat (TPR)-containing protein 0.05 OrthoFinder output from all 47 species
Adi_g016400 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Aev_g34698 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Ala_g11355 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Als_g18932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20701 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Als_g27903 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22784.t1 Aspi01Gene22784 regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25622.t1 Aspi01Gene25622 regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25626.t2 Aspi01Gene25626 regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Ceric.02G073000.1 Ceric.02G073000 regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Dcu_g04144 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.06 OrthoFinder output from all 47 species
LOC_Os02g48620.2 LOC_Os02g48620 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g02461 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Ore_g28877 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
Solyc01g086750.4.1 Solyc01g086750 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e015654_P001 Zm00001e015654 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e023389_P002 Zm00001e023389 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR025697 CLU_dom 384 669
IPR028275 CLU_N 101 177
IPR007967 GSKIP_dom 262 332
IPR033646 CLU-central 813 997
No external refs found!