1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01032044001

GSVIVT01032044001


Description : Polygalacturonase inhibitor OS=Pyrus communis


Gene families : OG0002518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032044001

Target Alias Description ECC score Gene Family Method Actions
Gb_21736 No alias no description available(sp|f4j8g2|rlp33_arath : 100.0) 0.02 OrthoFinder output from all 47 species
LOC_Os05g01370.1 LOC_Os05g01370 pathogen polygalacturonase inhibitor (PGIP) 0.03 OrthoFinder output from all 47 species
LOC_Os05g01380.1 PGIP2, ATPGIP2,... pathogen polygalacturonase inhibitor (PGIP) 0.01 OrthoFinder output from all 47 species
LOC_Os08g39940.1 ATPGIP1, PGIP1,... Polygalacturonase inhibitor 1 OS=Oryza sativa subsp.... 0.12 OrthoFinder output from all 47 species
MA_1001810g0020 No alias LRR receptor-like serine/threonine-protein kinase RCH1... 0.03 OrthoFinder output from all 47 species
MA_10428862g0010 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
MA_10429114g0010 No alias Receptor-like protein Cf-9 homolog OS=Solanum... 0.02 OrthoFinder output from all 47 species
MA_10432014g0010 No alias Receptor-like protein 9DC2 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
MA_10432854g0010 No alias Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
MA_10436129g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
MA_11057g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_116166g0010 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 OrthoFinder output from all 47 species
MA_128387g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
MA_170534g0010 No alias Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_177143g0010 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.03 OrthoFinder output from all 47 species
MA_177713g0010 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
MA_215266g0020 No alias Receptor-like protein 9DC3 OS=Solanum pimpinellifolium... 0.02 OrthoFinder output from all 47 species
MA_25228g0020 No alias LRR receptor-like serine/threonine-protein kinase RCH1... 0.03 OrthoFinder output from all 47 species
MA_59810g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_82361g0020 FLS2 no description available(sp|f4j8g2|rlp33_arath : 109.0) 0.02 OrthoFinder output from all 47 species
MA_87079g0010 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.02 OrthoFinder output from all 47 species
MA_9047991g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g065090.2.1 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.01 OrthoFinder output from all 47 species
Zm00001e029700_P001 ATPGIP1, PGIP1,... pathogen polygalacturonase inhibitor (PGIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 90 150
IPR001611 Leu-rich_rpt 421 434
IPR001611 Leu-rich_rpt 323 336
IPR013210 LRR_N_plant-typ 24 62
IPR001611 Leu-rich_rpt 374 393
No external refs found!