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  5. GSVIVT01032038001

GSVIVT01032038001 (SYN3, ATRAD21.2, ATSYN3)


Aliases : SYN3, ATRAD21.2, ATSYN3

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component


Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032038001
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT5G16270 ATRAD21.3, SYN4 sister chromatid cohesion 1 protein 4 0.03 OrthoFinder output from all 47 species
Aob_g16444 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.02 OrthoFinder output from all 47 species
Aop_g21978 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.16 OrthoFinder output from all 47 species
Ceric.35G066500.1 ATRAD21.3, SYN4,... mitotic-specific Kleisin-type component *(SCC1) of... 0.17 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.44 SYN3, ATRAD21.2, ATSYN3 Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
Cre09.g412450 ATRAD21.3, SYN4 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Dac_g37942 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.11 OrthoFinder output from all 47 species
Ehy_g29051 ATRAD21.3, SYN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g04800.1 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component SCC1 of cohesin... 0.02 OrthoFinder output from all 47 species
Msp_g31762 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.15 OrthoFinder output from all 47 species
Nbi_g13988 ATRAD21.3, SYN4 mitotic-specific Kleisin-type component *(SCC1) of... 0.1 OrthoFinder output from all 47 species
Solyc01g086690.2.1 SYN3, ATRAD21.2,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.07 OrthoFinder output from all 47 species
Solyc02g093930.4.1 AtRAD21.1, SYN2,... mitotic-specific Kleisin-type component SCC1 of cohesin... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006910 Rad21_Rec8_N 1 102
IPR006909 Rad21/Rec8_C_eu 655 704
No external refs found!