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  5. GSVIVT01031982001

GSVIVT01031982001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0002893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031982001

Target Alias Description ECC score Gene Family Method Actions
AT2G18328 ATRL4, RL4 RAD-like 4 0.07 OrthoFinder output from all 47 species
LOC_Os01g47370.1 LOC_Os01g47370 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14810.1 RL1, RSM2,... transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
LOC_Os05g50340.1 LOC_Os05g50340 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_10432538g0010 RL5, RSM4, ATRL5 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_16729g0010 RL1, RSM2, ATRL1 transcription factor (MYB-related) 0.06 OrthoFinder output from all 47 species
MA_254136g0010 RSM3, ATRL6, RL6 transcription factor (MYB-related) 0.07 OrthoFinder output from all 47 species
MA_41041g0010 RL1, RSM2, ATRL1 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
MA_413315g0010 RL5, RSM4, ATRL5 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
MA_957399g0010 RL5, RSM4, ATRL5 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Ore_g37786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g080500.3.1 ATRL2, MEE3,... transcription factor (MYB-related) 0.07 OrthoFinder output from all 47 species
Zm00001e032520_P001 ATRL2, MEE3,... transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 10 54
No external refs found!