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  5. GSVIVT01031911001

GSVIVT01031911001


Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component


Gene families : OG0005948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031911001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00156080 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
AT1G49380 No alias cytochrome c biogenesis protein family 0.05 OrthoFinder output from all 47 species
Adi_g012769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Aev_g03192 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ala_g05684 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Aob_g16302 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Aop_g07825 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04834.t1 Aspi01Gene04834 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Azfi_s0187.g056718 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ceric.13G010200.1 Ceric.13G010200 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Cre13.g575000 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Dac_g03338 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Dcu_g03888 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Dde_g26694 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ehy_g04866 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Gb_26769 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Len_g09808 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Lfl_g19291 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
MA_10434753g0010 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Mp3g21290.1 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Msp_g26028 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Nbi_g19038 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Ore_g05642 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Pir_g61712 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Pnu_g11622 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Sam_g04076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo52887 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Solyc10g051200.2.1 Solyc10g051200 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Spa_g12033 No alias assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Zm00001e005813_P001 Zm00001e005813 assembly factor CcsB of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
InterPro domains Description Start Stop
IPR007816 ResB-like_domain 427 533
IPR007816 ResB-like_domain 121 395
No external refs found!