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  5. LOC_Os04g39160.1

LOC_Os04g39160.1


Description : ssRNA polymerase (RDR2)


Gene families : OG_01_0000823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000823_tree ,
OG_02_0002293 (LandPlants) Phylogenetic Tree(s): OG_02_0002293_tree ,
OG_03_0008689 (SeedPlants) Phylogenetic Tree(s): OG_03_0008689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g39160.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007792001 No alias RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.03 Archaeplastida
Gb_28429 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c24_15800V3.1 No alias RNA-dependent RNA polymerase 1 0.02 Archaeplastida
Solyc03g114140.3.1 No alias ssRNA polymerase (RDR2) 0.03 Archaeplastida
GSVIVT01007792001 No alias RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.02 LandPlants
Solyc03g114140.3.1 No alias ssRNA polymerase (RDR2) 0.02 LandPlants
GSVIVT01007792001 No alias RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.02 SeedPlants
Solyc03g114140.3.1 No alias ssRNA polymerase (RDR2) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 381 957
No external refs found!