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  5. GSVIVT01031657001

GSVIVT01031657001


No description available


Gene families : OG0001520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031657001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00064900 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ala_g23157 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g09797 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Gb_29305 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g55364 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g07347 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g17901 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g18139 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc04g072890.4.1 Solyc04g072890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023407_P003 Zm00001e023407 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 391 428
IPR019417 DUF2415 444 480
No external refs found!