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  5. GSVIVT01031547001

GSVIVT01031547001 (UBC20)


Aliases : UBC20

Description : Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E2 ubiquitin conjugating protein


Gene families : OG0002468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031547001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00175140 UBC20,... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.06 OrthoFinder output from all 47 species
AT1G50490 UBC20 ubiquitin-conjugating enzyme 20 0.03 OrthoFinder output from all 47 species
Aop_g32819 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G015500.1 UBC19, Ceric.25G015500 E2 ubiquitin-conjugating protein & original description:... 0.07 OrthoFinder output from all 47 species
Dcu_g30508 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.05 OrthoFinder output from all 47 species
Gb_38981 UBC19 E2 ubiquitin conjugating protein (APC/C) 0.04 OrthoFinder output from all 47 species
LOC_Os01g16650.1 UBC20, LOC_Os01g16650 E2 ubiquitin conjugating protein (APC/C) 0.05 OrthoFinder output from all 47 species
Len_g15646 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11955 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g02664 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44238 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37401 No alias E2 ubiquitin-conjugating protein & original description: none 0.05 OrthoFinder output from all 47 species
Solyc11g065190.3.1 UBC20, Solyc11g065190 E2 ubiquitin conjugating protein (APC/C) 0.05 OrthoFinder output from all 47 species
Spa_g48430 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017345_P001 UBC20, Zm00001e017345 E2 ubiquitin conjugating protein (APC/C) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 38 172
No external refs found!