LOC_Os04g38930.1


Description : Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana (sp|o04491|ppr26_arath : 417.0)


Gene families : OG_01_0010041 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010041_tree ,
OG_02_0009710 (LandPlants) Phylogenetic Tree(s): OG_02_0009710_tree ,
OG_03_0008177 (SeedPlants) Phylogenetic Tree(s): OG_03_0008177_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38930.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AT1G09680 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
Gb_03162 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Zm00001e007886_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 378 427
IPR002885 Pentatricopeptide_repeat 449 497
IPR002885 Pentatricopeptide_repeat 518 567
IPR002885 Pentatricopeptide_repeat 274 322
IPR002885 Pentatricopeptide_repeat 346 376
IPR002885 Pentatricopeptide_repeat 243 271
No external refs found!