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  5. GSVIVT01031469001

GSVIVT01031469001


Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031469001
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00083270 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g021846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58852.t1 Aspi01Gene58852 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G026100.1 Ceric.13G026100 not classified & original description: pacid=50635606... 0.02 OrthoFinder output from all 47 species
Ceric.14G059700.1 Ceric.14G059700 not classified & original description: pacid=50633215... 0.03 OrthoFinder output from all 47 species
Ehy_g08468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006373001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g74370.1 LOC_Os01g74370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g09200.1 LOC_Os03g09200 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g18739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g16912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g054800.3.1 Solyc04g054800 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g066380.3.1 Solyc11g066380 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g10667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000820_P002 Zm00001e000820 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012257_P001 Zm00001e012257 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e022043_P001 Zm00001e022043 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 32 175
No external refs found!