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  5. GSVIVT01031430001

GSVIVT01031430001 (AGO5)


Aliases : AGO5

Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: GSVIVT01031430001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00203090 AGO4, OCP11,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00238500 AGO1,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AT2G27040 AGO4, OCP11 Argonaute family protein 0.03 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Adi_g017777 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02523 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33064 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29359 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58865 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aob_g04459 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05330 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Aop_g18592 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59574.t2 AGO1, Aspi01Gene59574 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029842 AGO1 not classified & original description: CDS=36-3650 0.03 OrthoFinder output from all 47 species
Azfi_s0460.g072055 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Cba_g07250 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16425 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Cba_g16426 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Len_g12529 AGO7, ZIP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18589 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
MA_10429131g0010 AGO1 Protein argonaute 1B OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_123150g0010 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 OrthoFinder output from all 47 species
MA_161177g0010 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_18547g0010 AGO1 Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g21068 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Pir_g66376 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Pp3c17_350V3.1 AGO1, Pp3c17_350 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.01 OrthoFinder output from all 47 species
Ppi_g14534 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009460 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Smo98227 AGO1 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Solyc01g010970.3.1 AGO7, ZIP, Solyc01g010970 Protein argonaute 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Spa_g23108 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007233_P001 AGO1, Zm00001e007233 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Zm00001e030606_P001 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
Zm00001e041452_P004 AGO1, Zm00001e041452 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR014811 ArgoL1 329 378
IPR032474 Argonaute_N 184 318
IPR032472 ArgoL2 519 566
IPR003165 Piwi 675 992
IPR003100 PAZ_dom 392 509
IPR032473 Argonaute_Mid_dom 577 655
No external refs found!