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  5. GSVIVT01031342001

GSVIVT01031342001


Description : Cell wall.pectin.modification and degradation.pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031342001

Target Alias Description ECC score Gene Family Method Actions
AT3G62060 No alias Pectinacetylesterase family protein 0.08 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.01 OrthoFinder output from all 47 species
Len_g49005 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15514 No alias pectin acetylesterase *(PAE) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g12003 No alias pectin acetylesterase *(PAE) & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g078260.3.1 Solyc03g078260 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc08g075030.3.1 Solyc08g075030 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Solyc12g005320.3.1 Solyc12g005320 pectin acetylesterase 0.01 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.01 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 1 344
No external refs found!