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  5. GSVIVT01031232001

GSVIVT01031232001


Description : Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor


Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031232001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00025530 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Aop_g25741 No alias translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0252.g060375 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Ceric.08G069700.1 Ceric.08G069700 translation peptide chain release factor *(PrfB) &... 0.02 OrthoFinder output from all 47 species
Mp4g12180.1 No alias PrfB-type translation peptide chain release factor 0.03 OrthoFinder output from all 47 species
Nbi_g10196 No alias translation peptide chain release factor *(PrfB) &... 0.03 OrthoFinder output from all 47 species
Nbi_g12251 ATPRFB, HCF109 translation peptide chain release factor *(PrfB) &... 0.05 OrthoFinder output from all 47 species
Smo75160 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Solyc01g100420.3.1 Solyc01g100420 PrfB-type translation peptide chain release factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006415 translational termination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000352 Pep_chain_release_fac_I 328 435
IPR005139 PCRF 129 316
No external refs found!