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  5. GSVIVT01031220001

GSVIVT01031220001


Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).SNU23 component


Gene families : OG0004658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031220001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT3G05760 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g00337 No alias component *(SNU23) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Sam_g40900 No alias component *(SNU23) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 86 111
No external refs found!