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  5. GSVIVT01031123001

GSVIVT01031123001 (HTA7)


Aliases : HTA7

Description : Chromatin organisation.histones.H2A-type histone


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031123001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00215390 HTA6,... Chromatin organisation.histones.H2A-type histone 0.05 OrthoFinder output from all 47 species
AMTR_s00058p00158560 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
AMTR_s00115p00128810 RAT5, HTA1,... Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G54690 GAMMA-H2AX,... gamma histone variant H2AX 0.04 OrthoFinder output from all 47 species
AT3G20670 HTA13 histone H2A 13 0.05 OrthoFinder output from all 47 species
AT4G27230 HTA2 histone H2A 2 0.08 OrthoFinder output from all 47 species
AT5G27670 HTA7 histone H2A 7 0.04 OrthoFinder output from all 47 species
AT5G59870 HTA6 histone H2A 6 0.04 OrthoFinder output from all 47 species
Adi_g050953 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052170 HTA10 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14593 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11673 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09992 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13886.t1 HTA6, Aspi01Gene13886 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19828.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41901.t1 RAT5, HTA1,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45042.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48040.t1 HTA7, Aspi01Gene48040 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G033300.1 HTA10, Ceric.01G033300 histone *(H2A) & original description: pacid=50592657... 0.04 OrthoFinder output from all 47 species
Ceric.01G127000.1 HTA7, Ceric.01G127000 histone *(H2A) & original description: pacid=50592416... 0.07 OrthoFinder output from all 47 species
Ceric.01G127100.1 HTA6, Ceric.01G127100 histone *(H2A) & original description: pacid=50591885... 0.08 OrthoFinder output from all 47 species
Ceric.01G127200.1 HTA6, Ceric.01G127200 histone *(H2A) & original description: pacid=50591993... 0.04 OrthoFinder output from all 47 species
Ceric.06G046500.1 HTA7, Ceric.06G046500 histone *(H2A) & original description: pacid=50619602... 0.09 OrthoFinder output from all 47 species
Ceric.08G041700.1 HTA6, Ceric.08G041700 histone *(H2A) & original description: pacid=50638647... 0.04 OrthoFinder output from all 47 species
Ceric.08G041800.1 HTA7, Ceric.08G041800 histone *(H2A) & original description: pacid=50638414... 0.03 OrthoFinder output from all 47 species
Ceric.09G005600.1 HTA6, Ceric.09G005600 histone *(H2A) & original description: pacid=50587119... 0.03 OrthoFinder output from all 47 species
Ceric.11G083100.1 HTA7, Ceric.11G083100 histone *(H2A) & original description: pacid=50596723... 0.08 OrthoFinder output from all 47 species
Ceric.16G070100.1 HTA10, Ceric.16G070100 histone *(H2A) & original description: pacid=50590230... 0.03 OrthoFinder output from all 47 species
Ceric.18G042300.1 HTA7, Ceric.18G042300 histone *(H2A) & original description: pacid=50622244... 0.04 OrthoFinder output from all 47 species
Ceric.1Z006200.1 HTA7, Ceric.1Z006200 histone *(H2A) & original description: pacid=50569283... 0.07 OrthoFinder output from all 47 species
Ceric.25G059300.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50594046... 0.05 OrthoFinder output from all 47 species
Ceric.32G068500.1 GAMMA-H2AX,... histone *(H2A) & original description: pacid=50597336... 0.06 OrthoFinder output from all 47 species
Ceric.37G035900.1 HTA6, Ceric.37G035900 histone *(H2A) & original description: pacid=50615631... 0.04 OrthoFinder output from all 47 species
Ceric.37G036300.1 HTA6, Ceric.37G036300 histone *(H2A) & original description: pacid=50616218... 0.04 OrthoFinder output from all 47 species
Ceric.37G036400.1 HTA7, Ceric.37G036400 histone *(H2A) & original description: pacid=50615787... 0.03 OrthoFinder output from all 47 species
Ceric.37G036600.1 HTA7, Ceric.37G036600 histone *(H2A) & original description: pacid=50616072... 0.03 OrthoFinder output from all 47 species
Cre06.g264750 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g264950 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g265350 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g266700 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g268050 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g268300 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g271350 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g273900 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g274200 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g274800 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g275850 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre06.g276500 HTA10 Chromatin organisation.histones.H2A-type histone 0.06 OrthoFinder output from all 47 species
Cre06.g276950 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre12.g504500 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre12.g504750 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre12.g505550 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre12.g506250 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre13.g570100 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre13.g590800 HTA10 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Cre13.g591150 HTA10 Chromatin organisation.histones.H2A-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g708550 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g709200 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g710400 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g711700 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g713400 HTA10 Chromatin organisation.histones.H2A-type histone 0.07 OrthoFinder output from all 47 species
Cre17.g714500 HTA10 Chromatin organisation.histones.H2A-type histone 0.08 OrthoFinder output from all 47 species
Dac_g34896 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05168 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42744 GAMMA-H2AX,... histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19076 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06384 HTA6 histone (H2A) 0.04 OrthoFinder output from all 47 species
Gb_07070 GAMMA-H2AX,... histone (H2A) 0.09 OrthoFinder output from all 47 species
Gb_25326 GAMMA-H2AX,... histone (H2A) 0.07 OrthoFinder output from all 47 species
Gb_25942 No alias histone (H2A) 0.05 OrthoFinder output from all 47 species
Gb_37579 HTA7 histone (H2A) 0.04 OrthoFinder output from all 47 species
Gb_39944 GAMMA-H2AX,... histone (H2A) 0.06 OrthoFinder output from all 47 species
LOC_Os01g31800.1 HTA12, LOC_Os01g31800 histone (H2A) 0.03 OrthoFinder output from all 47 species
LOC_Os03g17100.1 HTA12, LOC_Os03g17100 histone (H2A) 0.05 OrthoFinder output from all 47 species
LOC_Os05g02300.1 HTA12, LOC_Os05g02300 histone (H2A) 0.05 OrthoFinder output from all 47 species
LOC_Os07g36130.1 HTA2, LOC_Os07g36130 histone (H2A) 0.03 OrthoFinder output from all 47 species
LOC_Os07g36140.1 RAT5, HTA1,... histone (H2A) 0.04 OrthoFinder output from all 47 species
LOC_Os08g33100.1 HTA2, LOC_Os08g33100 histone (H2A) 0.06 OrthoFinder output from all 47 species
LOC_Os12g25120.1 HTA2, LOC_Os12g25120 histone (H2A) 0.03 OrthoFinder output from all 47 species
Len_g02525 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03532 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05644 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20304 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26088 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55104 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
MA_169054g0020 HTA10 histone (H2A) 0.08 OrthoFinder output from all 47 species
MA_213048g0010 HTA7 histone (H2A) 0.06 OrthoFinder output from all 47 species
MA_427046g0010 RAT5, HTA1, ATHTA1 histone (H2A) 0.05 OrthoFinder output from all 47 species
MA_962778g0010 HTA7 histone (H2A) 0.05 OrthoFinder output from all 47 species
Mp2g00760.1 GAMMA-H2AX,... histone (H2A) 0.08 OrthoFinder output from all 47 species
Mp3g00840.1 HTA10 histone (H2A) 0.09 OrthoFinder output from all 47 species
Nbi_g28966 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c5_1791V3.1 HTA10, Pp3c5_1791 histone H2A 10 0.03 OrthoFinder output from all 47 species
Pp3c5_1800V3.1 HTA10, Pp3c5_1800 histone H2A 10 0.03 OrthoFinder output from all 47 species
Pp3c6_29410V3.1 HTA10, Pp3c6_29410 histone H2A 10 0.03 OrthoFinder output from all 47 species
Sam_g10764 No alias histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10765 No alias histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29426 No alias histone *(H2A) & original description: none 0.07 OrthoFinder output from all 47 species
Smo166626 RAT5, HTA1, ATHTA1 Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder output from all 47 species
Smo170948 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder output from all 47 species
Smo73637 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Smo76653 HTA2 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Solyc01g099410.3.1 HTA7, Solyc01g099410 histone (H2A) 0.03 OrthoFinder output from all 47 species
Solyc06g084430.4.1 GAMMA-H2AX,... histone (H2A) 0.12 OrthoFinder output from all 47 species
Solyc09g010400.3.1 HTA12, Solyc09g010400 histone (H2A) 0.06 OrthoFinder output from all 47 species
Solyc09g074300.1.1 GAMMA-H2AX,... histone (H2A) 0.07 OrthoFinder output from all 47 species
Solyc10g006560.4.1 HTA10, Solyc10g006560 histone (H2A) 0.07 OrthoFinder output from all 47 species
Solyc11g073250.2.1 HTA12, Solyc11g073250 histone (H2A) 0.08 OrthoFinder output from all 47 species
Solyc12g005270.2.1 HTA10, Solyc12g005270 histone (H2A) 0.12 OrthoFinder output from all 47 species
Spa_g03104 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03210 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g03519 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03522 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03889 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16297 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32347 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32923 HTA6 histone *(H2A) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45415 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45749 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46345 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48382 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04849 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11136 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12865 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14389 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g42031 GAMMA-H2AX,... histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e010516_P001 RAT5, HTA1,... histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e012144_P001 GAMMA-H2AX,... histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e033014_P001 HTA6, Zm00001e033014 histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e034815_P001 HTA12, Zm00001e034815 histone (H2A) 0.06 OrthoFinder output from all 47 species
Zm00001e035183_P002 RAT5, HTA1,... histone (H2A) 0.03 OrthoFinder output from all 47 species
Zm00001e039735_P001 GAMMA-H2AX,... histone (H2A) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 98 129
IPR007125 Histone_H2A/H2B/H3 10 95
No external refs found!