GSVIVT01030905001

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin transporter (PILS-type)

Gene families : OG0000887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01030905001

Target	Alias	Description	ECC score	Gene Family Method
AT1G71090	No alias	Auxin efflux carrier family protein	0.03	OrthoFinder output from all 47 species
Als_g13846	No alias	auxin transporter *(PILS) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52944.t1	Aspi01Gene52944	auxin transporter *(PILS) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13762	No alias	auxin transporter *(PILS) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01012357001	No alias	Solute transport.carrier-mediated transport.BART...	0.03	OrthoFinder output from all 47 species
LOC_Os09g38130.1	LOC_Os09g38130	auxin efflux transporter (PILS). auxin transporter (PILS)	0.03	OrthoFinder output from all 47 species
MA_13545g0020	No alias	auxin efflux transporter (PILS). auxin transporter (PILS)	0.04	OrthoFinder output from all 47 species
Solyc03g031990.4.1	Solyc03g031990	auxin efflux transporter (PILS). auxin transporter (PILS)	0.03	OrthoFinder output from all 47 species
Spa_g54168	No alias	auxin transporter *(PILS) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0005666	RNA polymerase III complex	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006383	transcription by RNA polymerase III	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
CC	GO:0030880	RNA polymerase complex	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004776	Mem_trans	255	431
IPR004776	Mem_trans	52	225

External Links

No external refs found!