GSVIVT01030738001


No description available


Gene families : OG0005210 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005210_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030738001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT2G18900 No alias Transducin/WD40 repeat-like superfamily protein 0.24 OrthoFinder output from all 47 species
Adi_g085575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0026.g023316 No alias not classified & original description: CDS=130-2748 0.09 OrthoFinder output from all 47 species
Ceric.03G099700.1 Ceric.03G099700 not classified & original description: pacid=50571866... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.131 No alias No description available 0.06 OrthoFinder output from all 47 species
Cre04.g215350 No alias No description available 0.13 OrthoFinder output from all 47 species
Dac_g22350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os12g41620.1 LOC_Os12g41620 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Len_g01894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428181g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_40164g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9860436g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g09630.1 No alias no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Ore_g05181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo166499 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc07g066410.4.1 Solyc07g066410 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
Zm00001e003211_P001 Zm00001e003211 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 41 83
No external refs found!