1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01030637001

GSVIVT01030637001


Description : Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana


Gene families : OG0001959 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001959_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030637001
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264250 CRK10, RLK4,... Cysteine-rich receptor-like protein kinase 10... 0.07 OrthoFinder output from all 47 species
AMTR_s00035p00082360 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AMTR_s00035p00086030 EP1, CRK9,... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AMTR_s00060p00079250 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00106p00032870 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00036910 evm_27.TU.AmTr_v1... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT3G22060 No alias Receptor-like protein kinase-related family protein 0.09 OrthoFinder output from all 47 species
AT4G20670 No alias Domain of unknown function (DUF26) 0.03 OrthoFinder output from all 47 species
AT5G48540 No alias receptor-like protein kinase-related family protein 0.06 OrthoFinder output from all 47 species
GSVIVT01005169001 CRK25 Cysteine-rich receptor-like protein kinase 26... 0.02 OrthoFinder output from all 47 species
GSVIVT01036854001 CRK25 Cysteine-rich receptor-like protein kinase 25... 0.05 OrthoFinder output from all 47 species
GSVIVT01038008001 CRK26 Cysteine-rich receptor-like protein kinase 26... 0.04 OrthoFinder output from all 47 species
Gb_12661 No alias plasmodesmal protein (PDLP) 0.05 OrthoFinder output from all 47 species
Gb_12662 No alias plasmodesmal protein (PDLP) 0.03 OrthoFinder output from all 47 species
Gb_17522 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g16950.1 LOC_Os03g16950 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os03g19840.1 LOC_Os03g19840 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g36650.1 CRK29, LOC_Os03g36650 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g09780.1 CRK5, RLK6,... Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g02200.1 LOC_Os05g02200 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os08g04210.1 LOC_Os08g04210 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os08g04230.1 LOC_Os08g04230 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os08g04240.1 LOC_Os08g04240 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g04250.1 LOC_Os08g04250 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10428105g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10428105g0020 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10436801g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_128577g0010 CRK2 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_172149g0010 CRK34 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18855g0020 PDLP6 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_195678g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_215811g0010 CRK25 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5003050g0010 No alias Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_6876377g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_778884g0010 CRK2 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_97037g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g21651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080060.1.1 CRK26, Solyc02g080060 Cysteine-rich receptor-like protein kinase 29... 0.04 OrthoFinder output from all 47 species
Solyc09g057960.1.1 Solyc09g057960 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc12g005720.1.1 Solyc12g005720 Cysteine-rich repeat secretory protein 38 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Zm00001e017637_P005 EP1, CRK9, Zm00001e017637 Cysteine-rich receptor-like protein kinase 10 OS=Oryza... 0.05 OrthoFinder output from all 47 species
Zm00001e029633_P001 Zm00001e029633 Cysteine-rich repeat secretory protein 55 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002902 GNK2 170 259
IPR002902 GNK2 55 148
No external refs found!