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  5. GSVIVT01030497001

GSVIVT01030497001


Description : Solute transport.carrier-mediated transport.APC superfamily.NCS-2 family.unknown metabolite transporter (NAT-type)


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030497001

Target Alias Description ECC score Gene Family Method Actions
AT2G34190 No alias Xanthine/uracil permease family protein 0.03 OrthoFinder output from all 47 species
Aev_g38431 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25211 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09971 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03822 No alias solute transporter *(NAT) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g12772 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2748.g112888 No alias solute transporter *(NAT) & original description: CDS=518-1915 0.03 OrthoFinder output from all 47 species
Cba_g16647 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G015800.1 Ceric.01G015800 solute transporter *(NAT) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.09G071100.1 Ceric.09G071100 solute transporter *(NAT) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g05724 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14848 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12691 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Gb_40643 No alias solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
LOC_Os02g50820.1 LOC_Os02g50820 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Len_g00677 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24186 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03131 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18801 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03175 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13499 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05350 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07259 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09954 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02988 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06480 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09619 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Smo73581 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc05g006020.3.1 NAT7, ATNAT7,... solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Spa_g07450 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02025 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029011_P005 Zm00001e029011 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006043 NCS2 28 432
No external refs found!