Aliases : BUM1, SHL, STM, WAM, WAM1, BUM
Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.KNOX transcription factor
Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00026p00162850 | KNAT3,... | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00045p00169620 | KNAT6, KNAT6L,... | RNA biosynthesis.transcriptional activation.HB... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00085p00165180 | KNAT6, KNAT6L,... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
AT4G08150 | BP, BP1, KNAT1 | KNOTTED-like from Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
Adi_g058539 | KNAT6, KNAT6L, KNAT6S | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g107007 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g16413 | KNAT4 | KNOX-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Als_g15588 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g08926 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000431 | KNAT7, IXR11 | KNOX-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0350.g066569 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: CDS=1-1488 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0350.g066570 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0574.g078063 | KNAT3 | KNOX-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.15G063000.1 | KNAT4, Ceric.15G063000 | KNOX-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g06109 | BP, BP1, KNAT1 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g09080 | KNAT3 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g15128 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_00573 | BUM1, SHL, STM,... | transcription factor (KNOX) | 0.02 | OrthoFinder output from all 47 species | |
Gb_10887 | BP, BP1, KNAT1 | transcription factor (KNOX) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g19694.1 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g51690.2 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g03884.1 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g03770.1 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g19650.1 | KNAT3, LOC_Os08g19650 | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
MA_10428500g0010 | KNAT3 | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
MA_9556g0010 | BP, BP1, KNAT1 | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Ore_g19225 | KNAT3 | KNOX-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g25139 | KNAT3 | KNOX-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ore_g25497 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g33772 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g35975 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g36039 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g62008 | KNAT3 | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g02102 | KNAT3 | KNOX-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g17826 | KNAT3 | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g20569 | KNAT3 | KNOX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pp3c18_18720V3.1 | BUM1, SHL, STM,... | KNOTTED-like from Arabidopsis thaliana 2 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c19_5610V3.1 | Pp3c19_5610 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
Pp3c21_10320V3.1 | BUM1, SHL, STM,... | KNOTTED-like from Arabidopsis thaliana 2 | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g10499 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0009.g004352 | KNAT4 | KNOX-type transcription factor & original description: CDS=1-1356 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0250.g026749 | KNAT3 | not classified & original description: CDS=1-780 | 0.04 | OrthoFinder output from all 47 species | |
Sam_g36645 | No alias | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo159366 | BP, BP1, KNAT1 | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g100510.4.1 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g081120.4.1 | BUM1, SHL, STM,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g007120.3.1 | KNAT3, Solyc07g007120 | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10831 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005825_P002 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e011538_P001 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e017489_P001 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e027562_P001 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e029453_P001 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e039044_P001 | KNAT7, IXR11,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
No external refs found! |