Aliases : CSLB04, ATCSLB4, ATCSLB04
Description : Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica
Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00019p00246190 | CSLD1, ATCSLD1,... | Cell wall.hemicellulose.heteromannan.synthesis.mannan... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00022p00129900 | ATCSLD4, CSLD4,... | Cell wall.hemicellulose.heteromannan.synthesis.mannan... | 0.03 | OrthoFinder output from all 47 species | |
AT2G32530 | ATCSLB03, CSLB03, ATCSLB3 | cellulose synthase-like B3 | 0.05 | OrthoFinder output from all 47 species | |
AT2G32610 | ATCSLB01, ATCSLB1, CSLB01 | cellulose synthase-like B1 | 0.03 | OrthoFinder output from all 47 species | |
AT2G32620 | ATCSLB02, ATCSLB2, CSLB02 | cellulose synthase-like B | 0.03 | OrthoFinder output from all 47 species | |
AT4G15320 | CSLB06, ATCSLB6, ATCSLB06 | cellulose synthase-like B6 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g044360 | ATCSLD4, CSLD4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g057254 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g080371 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g106354 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g117946 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g29681 | AtCESA1, RSW1, CESA1 | catalytic component *(CesA) of cellulose synthase... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g17663 | AtCESA1, RSW1, CESA1 | catalytic component *(CesA) of cellulose synthase... | 0.02 | OrthoFinder output from all 47 species | |
Als_g34036 | IXR1, CEV1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g23590 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g27305 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g40582 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene30569.t1 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene45259.t1 | ATCSLD2, CSLD2,... | mannan synthase *(CSLD) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G069300.1 | AtCESA1, RSW1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.30G072100.1 | ATCSLD3, KJK,... | mannan synthase *(CSLD) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g01048 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g10159 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g14092 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g21512 | AtCESA1, RSW1, CESA1 | catalytic component *(CesA) of cellulose synthase... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g34792 | ATH-A, CESA2, ATCESA2 | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g37271 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g06204 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g26928 | CESA6, PRC1, IXR2, E112 | catalytic component *(CesA) of cellulose synthase... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01030467001 | CSLB04, ATCSLB4, ATCSLB04 | Cellulose synthase-like protein H1 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
Gb_06083 | MUR10, ATCESA7,... | Cellulose synthase A catalytic subunit 7 [UDP-forming]... | 0.03 | OrthoFinder output from all 47 species | |
Gb_07428 | AtCESA1, RSW1, CESA1 | catalytic component CesA of cellulose synthase complex | 0.06 | OrthoFinder output from all 47 species | |
Gb_07444 | AtCESA1, RSW1, CESA1 | catalytic component CesA of cellulose synthase complex | 0.03 | OrthoFinder output from all 47 species | |
Gb_17419 | CESA4, NWS2, IRX5 | catalytic component CesA of cellulose synthase complex | 0.05 | OrthoFinder output from all 47 species | |
Gb_30276 | MUR10, ATCESA7,... | Cellulose synthase A catalytic subunit 9 [UDP-forming]... | 0.03 | OrthoFinder output from all 47 species | |
Gb_31853 | MUR10, ATCESA7,... | catalytic component CesA of cellulose synthase complex | 0.05 | OrthoFinder output from all 47 species | |
Gb_39671 | ATCSLD3, KJK, CSLD3 | mannan synthase (CSLD) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g22980.1 | CSLD1, ATCSLD1,... | mannan synthase (CSLD) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g36610.1 | ATCSLD3, KJK,... | D-glucan synthase (CSLF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g36690.1 | ATCSLD2, CSLD2,... | D-glucan synthase (CSLF) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os08g06380.1 | ATCSLD2, CSLD2,... | mannan synthase (CSLD). D-glucan synthase (CSLF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g25490.1 | MUR10, ATCESA7,... | catalytic component CesA of cellulose synthase complex | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g30120.1 | ATCSLE1, CSLE1,... | Cellulose synthase-like protein E1 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g32980.1 | CESA4, NWS2,... | catalytic component CesA of cellulose synthase complex | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g42750.1 | ATCSLD3, KJK,... | mannan synthase (CSLD) | 0.04 | OrthoFinder output from all 47 species | |
Len_g59850 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10429177g0010 | CESA8, LEW2,... | catalytic component CesA of cellulose synthase complex | 0.03 | OrthoFinder output from all 47 species | |
MA_140410g0010 | MUR10, ATCESA7,... | catalytic component CesA of cellulose synthase complex | 0.04 | OrthoFinder output from all 47 species | |
MA_183130g0010 | CESA4, NWS2, IRX5 | catalytic component CesA of cellulose synthase complex | 0.05 | OrthoFinder output from all 47 species | |
MA_8061832g0010 | CESA4, NWS2, IRX5 | Cellulose synthase A catalytic subunit 4 [UDP-forming]... | 0.03 | OrthoFinder output from all 47 species | |
MA_9184g0010 | MUR10, ATCESA7,... | Cellulose synthase A catalytic subunit 7 [UDP-forming]... | 0.03 | OrthoFinder output from all 47 species | |
Mp2g05660.1 | ATCSLD3, KJK, CSLD3 | catalytic component CesA of cellulose synthase complex.... | 0.02 | OrthoFinder output from all 47 species | |
Mp2g05670.1 | ATCSLD3, KJK, CSLD3 | catalytic component CesA of cellulose synthase complex.... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g06388 | ATH-A, CESA2, ATCESA2 | catalytic component *(CesA) of cellulose synthase... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g09621 | MUR10, ATCESA7,... | catalytic component *(CesA) of cellulose synthase... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g34724 | IXR1, CEV1,... | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g36488 | ATH-A, CESA2, ATCESA2 | catalytic component *(CesA) of cellulose synthase... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g35645 | ATCSLE1, CSLE1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g13304 | ATH-A, CESA2, ATCESA2 | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g15169 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g19575 | ATCSLD4, CSLD4 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05332 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g24445 | No alias | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g27647 | No alias | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g38935 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo73698 | AtCESA1, RSW1, CESA1 | Cell wall.cellulose.synthesis.cellulose synthase complex... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g072240.3.1 | CESA8, LEW2,... | catalytic component CesA of cellulose synthase complex | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g072790.2.1 | ATH-A, CESA2,... | catalytic component CesA of cellulose synthase complex | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g043390.4.1 | ATCSLG3, CSLG3,... | Cellulose synthase-like protein G1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g051820.3.1 | ATCSLB03,... | Cellulose synthase-like protein H1 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g05758 | AtCESA1, RSW1, CESA1 | catalytic component *(CesA) of cellulose synthase... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g40617 | ATCSLD2, CSLD2 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g56568 | ATCSLD3, KJK, CSLD3 | mannan synthase *(CSLD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e002486_P001 | ATCSLD3, KJK,... | mannan synthase (CSLD) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010533_P001 | ATCSLD3, KJK,... | D-glucan synthase (CSLF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029046_P001 | CESA8, LEW2,... | Cellulose synthase A catalytic subunit 4 [UDP-forming]... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035205_P002 | ATCSLD2, CSLD2,... | D-glucan synthase (CSLF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e035207_P001 | ATCSLD3, KJK,... | D-glucan synthase (CSLF) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEA | Interproscan |
BP | GO:0030244 | cellulose biosynthetic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
No external refs found! |